Okay, sounds like a good time to do some checking and drawings may help.
For the overall wiring diagrams:
https://www.winnebago.com/Files/File...ram/Wiring.htm
There are two builds ( early and late) of that RV, so choose the correct after looking at the RV serial number. 7th digit of 1 is early build, 7th digit of 2 is late build!
Once on the right group, look for the "Chassis Electrical Box Assembly" group for the disconnect relays and where they set. Use the chart at top left of sheet one to get on the right sheet for your model!
That gets the drawing of the parts as we see them with lots of info for clues.
For the wire schematic style, go to "Body, 12 Volt Wiring Diagram" or for location info, go to the "installation" sheets.
Winnebago uses labels on the wires for ID.
Use this chart to "decode" the letters.
https://www.winnebago.com/Files/File...ical_guide.pdf
On drawings or wires, we can get the "from" and "to" info on wires from this chart.
I did not know if you were early or late but looking at early build here:
sheet 1
Click this snip to get a better view or go direct if I'm on wrong build?
Some info to show why not all power is cutoff when disconnect relay is open!
On both coach and chassis batteries there are wires going directly from the battery disconnect BEFORE the relay that go to the fuse buss bars!
Those will stay hot even when disconnect switch turns the relays off!
But a point to not is there are fuses that may give trouble on this section and they are not on the normal fuse/breaker panel!
Note the lbue marked items top left? Those may get blown when batteries are changed, so if still in trouble, they may need to be found and checked?
Keep in mind this is the drawing for the early build and check the correct drawing as the later build may have changes.
See if that does any good??